PDBe-MCP-Servers

PDBe MCP Servers integrate Protein Data Bank Europe resources with LLMs via Model Context Protocol. Provides seamless access to protein structure data through API tools and graph database schema assistance for intelligent Cypher query generation, bridging structural biology and AI research.

37 stars PythonOthers Updated Aug 2, 2026

ai-integrationapi-serverbioinformaticsknowledge-graphllm-toolsmcppdbeprotein-structurespythonstructural-biology

No README could be loaded. View the project on GitHub for full documentation.

Frequently asked questions

What is PDBe-MCP-Servers?

PDBe-MCP-Servers is PDBe MCP Servers integrate Protein Data Bank Europe resources with LLMs via Model Context Protocol. Provides seamless access to protein structure data through API tools and graph database schema assistance for intelligent Cypher query generation, bridging structural biology and AI research.

How do I install PDBe-MCP-Servers?

Open the GitHub repository and follow its README. Most MCP servers are added to your client's MCP config, then called by your agent.

Is PDBe-MCP-Servers open source?

Yes — it is hosted on GitHub at https://github.com/PDBeurope/PDBe-MCP-Servers and has 37 stars.

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